Synergy Disequilibrium Plots: graphical visualization of pairwise synergies and redundancies of SNPs with respect to a phenotype.

ABSTRACT:

Summary

We present a visualization tool applied on genome-wide association data, revealing disease-associated haplotypes, epistatically interacting loci, as well as providing visual signatures of multivariate correlations of genetic markers with respect to a phenotype.

Availability

Freely available on the web at: (http://www.ee.columbia.edu/~anastas/sdplots).

SUBMITTER: Watkinson J 

PROVIDER: S-EPMC2682510 | biostudies-literature | 2009 Jun

REPOSITORIES: biostudies-literature