A-MADMAN: annotation-based microarray data meta-analysis tool.

ABSTRACT:

Background

Publicly available datasets of microarray gene expression signals represent an unprecedented opportunity for extracting genomic relevant information and validating biological hypotheses. However, the exploitation of this exceptionally rich mine of information is still hampered by the lack of appropriate computational tools, able to overcome the critical issues raised by meta-analysis.

Results

This work presents A-MADMAN, an open source web application which allows the retrieval, annotation, organization and meta-analysis of gene expression datasets obtained from Gene Expression Omnibus. A-MADMAN addresses and resolves several open issues in the meta-analysis of gene expression data.

Conclusion

A-MADMAN allows i) the batch retrieval from Gene Expression Omni

SUBMITTER: Bisognin A 

PROVIDER: S-EPMC2711946 | biostudies-literature | 2009 Jun

REPOSITORIES: biostudies-literature