Gene expression profiling in susceptible interaction of grapevine with its fungal pathogen Eutypa lata: extending MapMan ontology for grapevine.

ABSTRACT:

Background

Whole genome transcriptomics analysis is a very powerful approach because it gives an overview of the activity of genes in certain cells or tissue types. However, biological interpretation of such results can be rather tedious. MapMan is a software tool that displays large datasets (e.g. gene expression data) onto diagrams of metabolic pathways or other processes and thus enables easier interpretation of results. The grapevine (Vitis vinifera) genome sequence has recently become available bringing a new dimension into associated research. Two microarray platforms were designed based on the TIGR Gene Index database and used in several physiological studies.

Results

To enable easy and effective visualization of those and further experiments, annotation of Vitis vini

SUBMITTER: Rotter A 

PROVIDER: S-EPMC2731041 | biostudies-literature | 2009 Aug

REPOSITORIES: biostudies-literature