Analyzing biological network parameters with CentiScaPe.

ABSTRACT:

Summary

The increasing availability of large network datasets along with the progresses in experimental high-throughput technologies have prompted the need for tools allowing easy integration of experimental data with data derived form network computational analysis. In order to enrich experimental data with network topological parameters, we have developed the Cytoscape plug-in CentiScaPe. The plug-in computes several network centrality parameters and allows the user to analyze existing relationships between experimental data provided by the users and node centrality values computed by the plug-in. CentiScaPe allows identifying network nodes that are relevant from both experimental and topological viewpoints. CentiScaPe also provides a Boolean logic-based tool that allows easy cha

SUBMITTER: Scardoni G 

PROVIDER: S-EPMC2781755 | biostudies-literature | 2009 Nov

REPOSITORIES: biostudies-literature