Modeling biomedical experimental processes with OBI.

ABSTRACT:

Background

Experimental descriptions are typically stored as free text without using standardized terminology, creating challenges in comparison, reproduction and analysis. These difficulties impose limitations on data exchange and information retrieval.

Results

The Ontology for Biomedical Investigations (OBI), developed as a global, cross-community effort, provides a resource that represents biomedical investigations in an explicit and integrative framework. Here we detail three real-world applications of OBI, provide detailed modeling information and explain how to use OBI.

Conclusion

We demonstrate how OBI can be applied to different biomedical investigations to both facilitate interpretation of the experimental process and increase the computational processing and

SUBMITTER: Brinkman RR 

PROVIDER: S-EPMC2903726 | biostudies-literature | 2010 Jun

REPOSITORIES: biostudies-literature