SynBioSS designer: a web-based tool for the automated generation of kinetic models for synthetic biological constructs.

ABSTRACT: Modeling tools can play an important role in synthetic biology the same way modeling helps in other engineering disciplines: simulations can quickly probe mechanisms and provide a clear picture of how different components influence the behavior of the whole. We present a brief review of available tools and present SynBioSS Designer. The Synthetic Biology Software Suite (SynBioSS) is used for the generation, storing, retrieval and quantitative simulation of synthetic biological networks. SynBioSS consists of three distinct components: the Desktop Simulator, the Wiki, and the Designer. SynBioSS Designer takes as input molecular parts involved in gene expression and regulation (e.g. promoters, transcription factors, ribosome binding sites, etc.), and automatically generates complete networks

SUBMITTER: Weeding E 

PROVIDER: S-EPMC2905524 | biostudies-literature | 2010 Jul

REPOSITORIES: biostudies-literature