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Complete genome sequence of Dyadobacter fermentans type strain (NS114).


ABSTRACT: Dyadobacter fermentans (Chelius and Triplett, 2000) is the type species of the genus Dyadobacter. It is of phylogenetic interest because of its location in the Cytophagaceae, a very diverse family within the order 'Sphingobacteriales'. D. fermentans has a mainly respiratory metabolism, stains Gram-negative, is non-motile and oxidase and catalase positive. It is characterized by the production of cell filaments in aging cultures, a flexirubin-like pigment and its ability to ferment glucose, which is almost unique in the aerobically living members of this taxonomically difficult family. Here we describe the features of this organism, together with the complete genome sequence, and its annotation. This is the first complete genome sequence of the sphingobacterial genus Dyadobacter, and this 6,967,790 bp long single replicon genome with its 5804 protein-coding and 50 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Lang E 

PROVIDER: S-EPMC3035232 | biostudies-literature | 2009 Sep

REPOSITORIES: biostudies-literature

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Complete genome sequence of Dyadobacter fermentans type strain (NS114).

Lang Elke E   Lapidus Alla A   Chertkov Olga O   Brettin Thomas T   Detter John C JC   Han Cliff C   Copeland Alex A   Glavina Del Rio Tijana T   Nolan Matt M   Chen Feng F   Lucas Susan S   Tice Hope H   Cheng Jan-Fang JF   Land Miriam M   Hauser Loren L   Chang Yun-Juan YJ   Jeffries Cynthia D CD   Kopitz Marcus M   Bruce David D   Goodwin Lynne L   Pitluck Sam S   Ovchinnikova Galina G   Pati Amrita A   Ivanova Natalia N   Mavrommatis Konstantinos K   Chen Amy A   Palaniappan Krishna K   Chain Patrick P   Bristow Jim J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Göker Markus M   Rohde Manfred M   Kyrpides Nikos C NC   Klenk Hans-Peter HP  

Standards in genomic sciences 20090924 2


Dyadobacter fermentans (Chelius and Triplett, 2000) is the type species of the genus Dyadobacter. It is of phylogenetic interest because of its location in the Cytophagaceae, a very diverse family within the order 'Sphingobacteriales'. D. fermentans has a mainly respiratory metabolism, stains Gram-negative, is non-motile and oxidase and catalase positive. It is characterized by the production of cell filaments in aging cultures, a flexirubin-like pigment and its ability to ferment glucose, which  ...[more]

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