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Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460).

ABSTRACT: Denitrovibrio acetiphilus Myhr and Torsvik 2000 is the type species of the genus Denitrovibrio in the bacterial family Deferribacteraceae. It is of phylogenetic interest because there are only six genera described in the family Deferribacteraceae. D. acetiphilus was isolated as a representative of a population reducing nitrate to ammonia in a laboratory column simulating the conditions in off-shore oil recovery fields. When nitrate was added to this column undesirable hydrogen sulfide production was stopped because the sulfate reducing populations were superseded by these nitrate reducing bacteria. Here we describe the features of this marine, mesophilic, obligately anaerobic organism respiring by nitrate reduction, together with the complete genome sequence, and annotation. This is the second complete genome sequence of the order Deferribacterales and the class Deferribacteres, which is the sole class in the phylum Deferribacteres. The 3,222,077 bp genome with its 3,034 protein-coding and 51 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Kiss H 

PROVIDER: S-EPMC3035293 | biostudies-literature | 2010 Jun

REPOSITORIES: biostudies-literature

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Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460).

Kiss Hajnalka H   Lang Elke E   Lapidus Alla A   Copeland Alex A   Nolan Matt M   Glavina Del Rio Tijana T   Chen Feng F   Lucas Susan S   Tice Hope H   Cheng Jan-Fang JF   Han Cliff C   Goodwin Lynne L   Pitluck Sam S   Liolios Konstantinos K   Pati Amrita A   Ivanova Natalia N   Mavromatis Konstantinos K   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Hauser Loren L   Chang Yun-Juan YJ   Jeffries Cynthia D CD   Detter John C JC   Brettin Thomas T   Spring Stefan S   Rohde Manfred M   Göker Markus M   Woyke Tanja T   Bristow James J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Kyrpides Nikos C NC   Klenk Hans-Peter HP  

Standards in genomic sciences 20100615 3

Denitrovibrio acetiphilus Myhr and Torsvik 2000 is the type species of the genus Denitrovibrio in the bacterial family Deferribacteraceae. It is of phylogenetic interest because there are only six genera described in the family Deferribacteraceae. D. acetiphilus was isolated as a representative of a population reducing nitrate to ammonia in a laboratory column simulating the conditions in off-shore oil recovery fields. When nitrate was added to this column undesirable hydrogen sulfide production  ...[more]