Template-free detection of macromolecular complexes in cryo electron tomograms.

ABSTRACT:

Motivation

Cryo electron tomography (CryoET) produces 3D density maps of biological specimen in its near native states. Applied to small cells, cryoET produces 3D snapshots of the cellular distributions of large complexes. However, retrieving this information is non-trivial due to the low resolution and low signal-to-noise ratio in tomograms. Current pattern recognition methods identify complexes by matching known structures to the cryo electron tomogram. However, so far only a small fraction of all protein complexes have been structurally resolved. It is, therefore, of great importance to develop template-free methods for the discovery of previously unknown protein complexes in cryo electron tomograms.

Results

Here, we have developed an inference method for the template-fre

SUBMITTER: Xu M 

PROVIDER: S-EPMC3117359 | biostudies-literature | 2011 Jul

REPOSITORIES: biostudies-literature