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Identification of a microRNA that activates gene expression by repressing nonsense-mediated RNA decay.


ABSTRACT: Nonsense-mediated decay (NMD) degrades both normal and aberrant transcripts harboring stop codons in particular contexts. Mutations that perturb NMD cause neurological disorders in humans, suggesting that NMD has roles in the brain. Here, we identify a brain-specific microRNA-miR-128-that represses NMD and thereby controls batteries of transcripts in neural cells. miR-128 represses NMD by targeting the RNA helicase UPF1 and the exon-junction complex core component MLN51. The ability of miR-128 to regulate NMD is a conserved response occurring in frogs, chickens, and mammals. miR-128 levels are dramatically increased in differentiating neuronal cells and during brain development, leading to repressed NMD and upregulation of mRNAs normally targeted for decay by NMD; overrepresented are those encoding proteins controlling neuron development and function. Together, these results suggest the existence of a conserved RNA circuit linking the microRNA and NMD pathways that induces cell type-specific transcripts during development.

SUBMITTER: Bruno IG 

PROVIDER: S-EPMC3123134 | biostudies-literature | 2011 May

REPOSITORIES: biostudies-literature

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Identification of a microRNA that activates gene expression by repressing nonsense-mediated RNA decay.

Bruno Ivone G IG   Karam Rachid R   Huang Lulu L   Bhardwaj Anjana A   Lou Chih H CH   Shum Eleen Y EY   Song Hye-Won HW   Corbett Mark A MA   Gifford Wesley D WD   Gecz Jozef J   Pfaff Samuel L SL   Wilkinson Miles F MF  

Molecular cell 20110501 4


Nonsense-mediated decay (NMD) degrades both normal and aberrant transcripts harboring stop codons in particular contexts. Mutations that perturb NMD cause neurological disorders in humans, suggesting that NMD has roles in the brain. Here, we identify a brain-specific microRNA-miR-128-that represses NMD and thereby controls batteries of transcripts in neural cells. miR-128 represses NMD by targeting the RNA helicase UPF1 and the exon-junction complex core component MLN51. The ability of miR-128 t  ...[more]

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