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High-throughput behavioral analysis in C. elegans.


ABSTRACT: We designed a real-time computer vision system, the Multi-Worm Tracker (MWT), which can simultaneously quantify the behavior of dozens of Caenorhabditis elegans on a Petri plate at video rates. We examined three traditional behavioral paradigms using this system: spontaneous movement on food, where the behavior changes over tens of minutes; chemotaxis, where turning events must be detected accurately to determine strategy; and habituation of response to tap, where the response is stochastic and changes over time. In each case, manual analysis or automated single-worm tracking would be tedious and time-consuming, but the MWT system allowed rapid quantification of behavior with minimal human effort. Thus, this system will enable large-scale forward and reverse genetic screens for complex behaviors.

SUBMITTER: Swierczek NA 

PROVIDER: S-EPMC3128206 | biostudies-literature | 2011 Jun

REPOSITORIES: biostudies-literature

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High-throughput behavioral analysis in C. elegans.

Swierczek Nicholas A NA   Giles Andrew C AC   Rankin Catharine H CH   Kerr Rex A RA  

Nature methods 20110605 7


We designed a real-time computer vision system, the Multi-Worm Tracker (MWT), which can simultaneously quantify the behavior of dozens of Caenorhabditis elegans on a Petri plate at video rates. We examined three traditional behavioral paradigms using this system: spontaneous movement on food, where the behavior changes over tens of minutes; chemotaxis, where turning events must be detected accurately to determine strategy; and habituation of response to tap, where the response is stochastic and  ...[more]

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