Three-Dimensional Structure of Arabidopsis thaliana Lipase Predicted by Homology Modeling Method.

ABSTRACT: Triacylglycerol lipases have been thoroughly characterized in mammals and microorganisms. By contrast, very little is known about plant lipases. In this investigation, a homology model of Arabidopsis thaliana lipase (NP_179126) was constructed using a human gastric lipase (PDB ID: 1HLG), as a template for model building. This model was then assessed for stereochemical quality and side chain environment. Natural substrates: tributyrin, trioctanoin and triolen were docked into the model to investigate ligand-substrate interaction.

SUBMITTER: Messaoudi A 

PROVIDER: S-EPMC3140413 | biostudies-literature | 2011

REPOSITORIES: biostudies-literature