Ontology highlight
ABSTRACT:
SUBMITTER: Cross S
PROVIDER: S-EPMC3158682 | biostudies-literature | 2009 Sep
REPOSITORIES: biostudies-literature
Journal of molecular graphics & modelling 20090504 2
We report the addition of two visualisation algorithms, termed PaperChain and Twister, to the freely available Visual Molecular Dynamics (VMD) package. These algorithms produce visualisations of complex cyclic molecules and multi-branched polysaccharides and are a generalization and optimization of those we previously developed in a standalone package for carbohydrates. PaperChain highlights each ring in a molecular structure with a polygon, which is coloured according to the ring pucker. Twiste ...[more]