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Recursive partitioning of resistant mutations for longitudinal markers based on a U-type score.


ABSTRACT: Development of human immunodeficiency virus resistance mutations is a major cause of failure of antiretroviral treatment. We develop a recursive partitioning method to correlate high-dimensional viral sequences with repeatedly measured outcomes. The splitting criterion of this procedure is based on a class of U-type score statistics. The proposed method is flexible enough to apply to a broad range of problems involving longitudinal outcomes. Simulation studies are performed to explore the finite-sample properties of the proposed method, which is also illustrated through analysis of data collected in 3 phase II clinical trials testing the antiretroviral drug efavirenz.

SUBMITTER: Hu C 

PROVIDER: S-EPMC3169671 | biostudies-literature | 2011 Oct

REPOSITORIES: biostudies-literature

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Recursive partitioning of resistant mutations for longitudinal markers based on a U-type score.

Hu Chengcheng C   Degruttola Victor V  

Biostatistics (Oxford, England) 20110519 4


Development of human immunodeficiency virus resistance mutations is a major cause of failure of antiretroviral treatment. We develop a recursive partitioning method to correlate high-dimensional viral sequences with repeatedly measured outcomes. The splitting criterion of this procedure is based on a class of U-type score statistics. The proposed method is flexible enough to apply to a broad range of problems involving longitudinal outcomes. Simulation studies are performed to explore the finite  ...[more]

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