Deploying mutation impact text-mining software with the SADI Semantic Web Services framework.

ABSTRACT:

Background

Mutation impact extraction is an important task designed to harvest relevant annotations from scientific documents for reuse in multiple contexts. Our previous work on text mining for mutation impacts resulted in (i) the development of a GATE-based pipeline that mines texts for information about impacts of mutations on proteins, (ii) the population of this information into our OWL DL mutation impact ontology, and (iii) establishing an experimental semantic database for storing the results of text mining.

Results

This article explores the possibility of using the SADI framework as a medium for publishing our mutation impact software and data. SADI is a set of conventions for creating web services with semantic descriptions that facilitate automatic discovery and or

SUBMITTER: Riazanov A 

PROVIDER: S-EPMC3194198 | biostudies-literature | 2011

REPOSITORIES: biostudies-literature