Savant: genome browser for high-throughput sequencing data.

ABSTRACT:

Motivation

The advent of high-throughput sequencing (HTS) technologies has made it affordable to sequence many individuals' genomes. Simultaneously the computational analysis of the large volumes of data generated by the new sequencing machines remains a challenge. While a plethora of tools are available to map the resulting reads to a reference genome, and to conduct primary analysis of the mappings, it is often necessary to visually examine the results and underlying data to confirm predictions and understand the functional effects, especially in the context of other datasets.

Results

We introduce Savant, the Sequence Annotation, Visualization and ANalysis Tool, a desktop visualization and analysis browser for genomic data. Savant was developed for visualizing and analyzin

SUBMITTER: Fiume M 

PROVIDER: S-EPMC3271355 | biostudies-literature | 2010 Aug

REPOSITORIES: biostudies-literature