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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta.


ABSTRACT: Spirochaeta coccoides Dröge et al. 2006 is a member of the genus Spirochaeta Ehrenberg 1835, one of the oldest named genera within the Bacteria. S. coccoides is an obligately anaerobic, Gram-negative, non-motile, spherical bacterium that was isolated from the hindgut contents of the termite Neotermes castaneus. The species is of interest because it may play an important role in the digestion of breakdown products from cellulose and hemicellulose in the termite gut. Here we provide a taxonomic re-evaluation for strain SPN1(T), and based on physiological and genomic characteristics, we propose its reclassification as a novel species in the genus Sphaerochaeta, a recently published sister group of the Spirochaeta. The 2,227,296 bp long genome of strain SPN1(T) with its 1,866 protein-coding and 58 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

SUBMITTER: Abt B 

PROVIDER: S-EPMC3388779 | biostudies-literature | 2012 May

REPOSITORIES: biostudies-literature

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Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta.

Abt Birte B   Han Cliff C   Scheuner Carmen C   Lu Megan M   Lapidus Alla A   Nolan Matt M   Lucas Susan S   Hammon Nancy N   Deshpande Shweta S   Cheng Jan-Fang JF   Tapia Roxanne R   Goodwin Lynne A LA   Pitluck Sam S   Liolios Konstantinos K   Pagani Ioanna I   Ivanova Natalia N   Mavromatis Konstantinos K   Mikhailova Natalia N   Huntemann Marcel M   Pati Amrita A   Chen Amy A   Palaniappan Krishna K   Land Miriam M   Hauser Loren L   Brambilla Evelyne-Marie EM   Rohde Manfred M   Spring Stefan S   Gronow Sabine S   Göker Markus M   Woyke Tanja T   Bristow James J   Eisen Jonathan A JA   Markowitz Victor V   Hugenholtz Philip P   Kyrpides Nikos C NC   Klenk Hans-Peter HP   Detter John C JC  

Standards in genomic sciences 20120504 2


Spirochaeta coccoides Dröge et al. 2006 is a member of the genus Spirochaeta Ehrenberg 1835, one of the oldest named genera within the Bacteria. S. coccoides is an obligately anaerobic, Gram-negative, non-motile, spherical bacterium that was isolated from the hindgut contents of the termite Neotermes castaneus. The species is of interest because it may play an important role in the digestion of breakdown products from cellulose and hemicellulose in the termite gut. Here we provide a taxonomic re  ...[more]

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