Annotation of functional variation in personal genomes using RegulomeDB.

ABSTRACT: As the sequencing of healthy and disease genomes becomes more commonplace, detailed annotation provides interpretation for individual variation responsible for normal and disease phenotypes. Current approaches focus on direct changes in protein coding genes, particularly nonsynonymous mutations that directly affect the gene product. However, most individual variation occurs outside of genes and, indeed, most markers generated from genome-wide association studies (GWAS) identify variants outside of coding segments. Identification of potential regulatory changes that perturb these sites will lead to a better localization of truly functional variants and interpretation of their effects. We have developed a novel approach and database, RegulomeDB, which guides interpretation of regulatory vari

SUBMITTER: Boyle AP 

PROVIDER: S-EPMC3431494 | biostudies-literature | 2012 Sep

REPOSITORIES: biostudies-literature