Nozzle: a report generation toolkit for data analysis pipelines.

ABSTRACT:

Summary

We have developed Nozzle, an R package that provides an Application Programming Interface to generate HTML reports with dynamic user interface elements. Nozzle was designed to facilitate summarization and rapid browsing of complex results in data analysis pipelines where multiple analyses are performed frequently on big datasets. The package can be applied to any project where user-friendly reports need to be created.

Availability

The R package is available on CRAN at http://cran.r-project.org/package=Nozzle.R1. Examples and additional materials are available at http://gdac.broadinstitute.org/nozzle. The source code is also available at http://www.github.com/parklab/Nozzle.

Supplementary information

Supplementary data are available at Bioinformatics online.

SUBMITTER: Gehlenborg N 

PROVIDER: S-EPMC3624805 | biostudies-literature | 2013 Apr

REPOSITORIES: biostudies-literature