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Mass spectrometry-based metabolomics of single yeast cells.


ABSTRACT: Single-cell level measurements are necessary to characterize the intrinsic biological variability in a population of cells. In this study, we demonstrate that, with the microarrays for mass spectrometry platform, we are able to observe this variability. We monitor environmentally (2-deoxy-D-glucose) and genetically (?PFK2) perturbed Saccharomyces cerevisiae cells at the single-cell, few-cell, and population levels. Correlation plots between metabolites from the glycolytic pathway, as well as with the observed ATP/ADP ratio as a measure of cellular energy charge, give biological insight that is not accessible from population-level metabolomic data.

SUBMITTER: Ibanez AJ 

PROVIDER: S-EPMC3670324 | biostudies-literature | 2013 May

REPOSITORIES: biostudies-literature

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Mass spectrometry-based metabolomics of single yeast cells.

Ibáñez Alfredo J AJ   Fagerer Stephan R SR   Schmidt Anna Mareike AM   Urban Pawel L PL   Jefimovs Konstantins K   Geiger Philipp P   Dechant Reinhard R   Heinemann Matthias M   Zenobi Renato R  

Proceedings of the National Academy of Sciences of the United States of America 20130513 22


Single-cell level measurements are necessary to characterize the intrinsic biological variability in a population of cells. In this study, we demonstrate that, with the microarrays for mass spectrometry platform, we are able to observe this variability. We monitor environmentally (2-deoxy-D-glucose) and genetically (ΔPFK2) perturbed Saccharomyces cerevisiae cells at the single-cell, few-cell, and population levels. Correlation plots between metabolites from the glycolytic pathway, as well as wit  ...[more]

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