Estimates of risk of window-period transmission of blood-borne viral diseases in Quebec.
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ABSTRACT:
SUBMITTER: Germain M
PROVIDER: S-EPMC374198 | biostudies-literature | 2004 Mar
REPOSITORIES: biostudies-literature
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Estimates of risk of window-period transmission of blood-borne viral diseases in Quebec.
Germain Marc M Gélinas Stéphanie S Delage Gilles G
CMAJ : Canadian Medical Association journal = journal de l'Association medicale canadienne 20040301 7
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Project description:BackgroundClimate change is increasing the dispersion of mosquitoes and the spread of viruses of which some mosquitoes are the main vectors. In Quebec, the surveillance and management of endemic mosquito-borne diseases, such as West Nile virus or Eastern equine encephalitis, could be improved by mapping the areas of risk supporting vector populations. However, there is currently no active tool tailored to Quebec that can predict mosquito population abundances, and we propose, with this work, to help fill this gap.MethodsFour species of mosquitos were studied in this project for the period from 2003 to 2016 for the southern part of the province of Quebec: Aedes vexans (VEX), Coquillettidia perturbans (CQP), Culex pipiens-restuans group (CPR) and Ochlerotatus stimulans group (SMG) species. We used a negative binomial regression approach, including a spatial component, to model the abundances of each species or species group as a function of meteorological and land-cover variables. We tested several sets of variables combination, regional and local scale variables for landcover and different lag period for the day of capture for weather variables, to finally select one best model for each species.ResultsModels selected showed the importance of the spatial component, independently of the environmental variables, at the larger spatial scale. In these models, the most important land-cover predictors that favored CQP and VEX were 'forest', and 'agriculture' (for VEX only). Land-cover 'urban' had negative impact on SMG and CQP. The weather conditions on the trapping day and previous weather conditions summarized over 30 or 90 days were preferred over a shorter period of seven days, suggesting current and long-term previous weather conditions effects on mosquito abundance.ConclusionsThe strength of the spatial component highlights the difficulties in modelling the abundance of mosquito species and the model selection shows the importance of selecting the right environmental predictors, especially when choosing the temporal and spatial scale of these variables. Climate and landscape variables were important for each species or species group, suggesting it is possible to consider their use in predicting long-term spatial variationsin the abundance of mosquitoes potentially harmful to public health in southern Quebec.
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Project description:BackgroundCharacterisation of human-associated viral communities is essential for epidemiological surveillance and to be able to anticipate new potential threats for blood transfusion safety. In high-resource countries, the risk of blood-borne agent transmission of well-known viruses (HBV, HCV, HIV and HTLV) is currently considered to be under control. However, other unknown or unsuspected viruses may be transmitted to recipients by blood-derived products. To investigate this, the virome of plasma from individuals at high risk for parenterally and sexually transmitted infections was analysed by high throughput sequencing (HTS).Materials and methodsPurified nucleic acids from two pools of 50 samples from recipients of multiple transfusions, and three pools containing seven plasma samples from either HBV-, HCV- or HIV-infected blood donors, were submitted to HTS.ResultsSequences from resident anelloviruses and HPgV were evidenced in all pools. HBV and HCV sequences were detected in pools containing 3.8×10(3) IU/mL of HBV-DNA and 1.7×10(5) IU/mL of HCV-RNA, respectively, whereas no HIV sequence was found in a pool of 150 copies/mL of HIV-RNA. This suggests a lack of sensitivity in HTS performance in detecting low levels of virus. In addition, this study identified other issues, including laboratory contaminants and the uncertainty of taxonomic assignment of short sequence. No sequence suggestive of a new viral species was identified.DiscussionThis study did not identify any new blood-borne virus in high-risk individuals. However, rare and/or viruses present at very low titre could have escaped our protocol. Our results demonstrate the positive contribution of HTS in the detection of viral sequences in blood donations.
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