PROGgene: gene expression based survival analysis web application for multiple cancers.

ABSTRACT:

Background

Identification of prognostic mRNA biomarkers has been done for various cancer types. The data that are published from such studies are archived in public repositories. There are hundreds of such datasets available for multiple cancer types in public repositories. Wealth of such data can be utilized to study prognostic implications of mRNA in different cancers as well as in different populations or subtypes of same cancer.

Description

We have created a web application that can be used for studying prognostic implications of mRNA biomarkers in a variety of cancers. We have compiled data from public repositories such as GEO, EBI Array Express and The Cancer Genome Atlas for creating this tool. With 64 patient series from 18 cancer types in our database, this tool pro

SUBMITTER: Goswami CP 

PROVIDER: S-EPMC3875898 | biostudies-literature | 2013 Oct

REPOSITORIES: biostudies-literature