Estimating telomere length from whole genome sequence data.

ABSTRACT: Telomeres play a key role in replicative ageing and undergo age-dependent attrition in vivo. Here, we report a novel method, TelSeq, to measure average telomere length from whole genome or exome shotgun sequence data. In 260 leukocyte samples, we show that TelSeq results correlate with Southern blot measurements of the mean length of terminal restriction fragments (mTRFs) and display age-dependent attrition comparably well as mTRFs.

SUBMITTER: Ding Z 

PROVIDER: S-EPMC4027178 | biostudies-literature | 2014 May

REPOSITORIES: biostudies-literature