InPHAP: interactive visualization of genotype and phased haplotype data.

ABSTRACT:

Background

To understand individual genomes it is necessary to look at the variations that lead to changes in phenotype and possibly to disease. However, genotype information alone is often not sufficient and additional knowledge regarding the phase of the variation is needed to make correct interpretations. Interactive visualizations, that allow the user to explore the data in various ways, can be of great assistance in the process of making well informed decisions. But, currently there is a lack for visualizations that are able to deal with phased haplotype data.

Results

We present inPHAP, an interactive visualization tool for genotype and phased haplotype data. inPHAP features a variety of interaction possibilities such as zooming, sorting, filtering and aggregation of ro

SUBMITTER: Jager G 

PROVIDER: S-EPMC4083868 | biostudies-literature | 2014 Jul

REPOSITORIES: biostudies-literature