Alignment-Annotator web server: rendering and annotating sequence alignments.

ABSTRACT:

Unlabelled

Alignment-Annotator is a novel web service designed to generate interactive views of annotated nucleotide and amino acid sequence alignments (i) de novo and (ii) embedded in other software. All computations are performed at server side. Interactivity is implemented in HTML5, a language native to web browsers. The alignment is initially displayed using default settings and can be modified with the graphical user interfaces. For example, individual sequences can be reordered or deleted using drag and drop, amino acid color code schemes can be applied and annotations can be added. Annotations can be made manually or imported (BioDAS servers, the UniProt, the Catalytic Site Atlas and the PDB). Some edits take immediate effect while others require server interaction and may t

SUBMITTER: Gille C 

PROVIDER: S-EPMC4086088 | biostudies-literature | 2014 Jul

REPOSITORIES: biostudies-literature