Transcriptome analysis gene expression in the liver of Coilia nasus during the stress response.

ABSTRACT:

Background

The estuarine tapertail anchovy (Coilia nasus) is widely distributed in the Yangtze River, the coastal waters of China, Korea, and the Ariake Sound of Japan. It is a commercially important species owing to its nutritional value and delicate flavor. However, Coilia nasus is strongly responsive to stress, this often results in death, which causes huge losses. In this study, we used next-generation sequencing technologies to study changes in gene expression in response to loading stress and the mechanism of death caused by loading stress in Coilia nasus.

Results

Using next-generation RNA-seq technologies on an Illumina HiSeq 2000 platform, we assembled a de novo transcriptome and tested for differential expression in response to stress. A total of 65,129 unigenes wer

SUBMITTER: Du F 

PROVIDER: S-EPMC4094779 | biostudies-literature | 2014 Jul

REPOSITORIES: biostudies-literature