Quantitative trait locus mapping methods for diversity outbred mice.

ABSTRACT: Genetic mapping studies in the mouse and other model organisms are used to search for genes underlying complex phenotypes. Traditional genetic mapping studies that employ single-generation crosses have poor mapping resolution and limit discovery to loci that are polymorphic between the two parental strains. Multiparent outbreeding populations address these shortcomings by increasing the density of recombination events and introducing allelic variants from multiple founder strains. However, multiparent crosses present new analytical challenges and require specialized software to take full advantage of these benefits. Each animal in an outbreeding population is genetically unique and must be genotyped using a high-density marker set; regression models for mapping must accommodate multiple fo

SUBMITTER: Gatti DM 

PROVIDER: S-EPMC4169154 | biostudies-literature | 2014 Sep

REPOSITORIES: biostudies-literature