De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences.

ABSTRACT:

Background

Nonhuman primates are important for both biomedical studies and understanding human evolution. Although research in these areas has mostly focused on Old World primates, such as the rhesus macaque, the common marmoset (Callithrix jacchus), a New World primate, offers important advantages in comparison to other primates, such as an accelerated lifespan. To conduct Next Generation expression studies or to study primate evolution, a high quality annotation of the marmoset genome is required. The availability of marmoset transcriptome data from five tissues, including both raw sequences and assembled transcripts, will aid in the annotation of the newly released marmoset assembly.

Findings

RNA WAS EXTRACTED FROM FIVE TISSUES: skeletal muscle, bladder and hippocampus fr

SUBMITTER: Maudhoo MD 

PROVIDER: S-EPMC4169894 | biostudies-literature | 2014

REPOSITORIES: biostudies-literature