Gold rotor bead tracking for high-speed measurements of DNA twist, torque and extension.

ABSTRACT: Single-molecule measurements of DNA twist and extension have been used to reveal physical properties of the double helix and to characterize structural dynamics and mechanochemistry in nucleoprotein complexes. However, the spatiotemporal resolution of twist measurements has been limited by the use of angular probes with high rotational drag, which prevents detection of short-lived intermediates or small angular steps. We introduce gold rotor bead tracking (AuRBT), which yields >100× improvement in time resolution over previous techniques. AuRBT employs gold nanoparticles as bright low-drag rotational and extensional probes, which are monitored by instrumentation that combines magnetic tweezers with objective-side evanescent darkfield microscopy. Our analysis of high-speed structural dynami

SUBMITTER: Lebel P 

PROVIDER: S-EPMC4211898 | biostudies-literature | 2014 Apr

REPOSITORIES: biostudies-literature