Detection of a novel active transposable element in Caldicellulosiruptor hydrothermalis and a new search for elements in this genus.

ABSTRACT: We show that a previously annotated hypothetical protein is the transposase of a new and active IS element, ISCahy1, widespread in Caldicellulosiruptor species. Transposition generated an 11-bp direct repeat at the insertion site in Caldicellulosiruptor hydrothermalis, suggesting a cut-and-paste mechanism. The discovery of an active insertion sequence in Caldicellulosiruptor species led to a survey of potential IS elements in the genome sequences of eight Caldicellulosiruptor species that identified several new elements, including one novel to this genus.

SUBMITTER: Chung D 

PROVIDER: S-EPMC4290023 | biostudies-literature | 2013 May

REPOSITORIES: biostudies-literature