Unknown

Dataset Information

0

Unexpected repertoire of metazoan transcription factors in the unicellular holozoan Capsaspora owczarzaki.


ABSTRACT: How animals (metazoans) originated from their single-celled ancestors remains a major question in biology. As transcriptional regulation is crucial to animal development, deciphering the early evolution of associated transcription factors (TFs) is critical to understanding metazoan origins. In this study, we uncovered the repertoire of 17 metazoan TFs in the amoeboid holozoan Capsaspora owczarzaki, a representative of a unicellular lineage that is closely related to choanoflagellates and metazoans. Phylogenetic and comparative genomic analyses with the broadest possible taxonomic sampling allowed us to formulate new hypotheses regarding the origin and evolution of developmental metazoan TFs. We show that the complexity of the TF repertoire in C. owczarzaki is strikingly high, pushing back further the origin of some TFs formerly thought to be metazoan specific, such as T-box or Runx. Nonetheless, TF families whose beginnings antedate the origin of the animal kingdom, such as homeodomain or basic helix-loop-helix, underwent significant expansion and diversification along metazoan and eumetazoan stems.

SUBMITTER: Sebe-Pedros A 

PROVIDER: S-EPMC4342549 | biostudies-literature | 2011 Mar

REPOSITORIES: biostudies-literature

altmetric image

Publications

Unexpected repertoire of metazoan transcription factors in the unicellular holozoan Capsaspora owczarzaki.

Sebé-Pedrós Arnau A   de Mendoza Alex A   Lang B Franz BF   Degnan Bernard M BM   Ruiz-Trillo Iñaki I  

Molecular biology and evolution 20101117 3


How animals (metazoans) originated from their single-celled ancestors remains a major question in biology. As transcriptional regulation is crucial to animal development, deciphering the early evolution of associated transcription factors (TFs) is critical to understanding metazoan origins. In this study, we uncovered the repertoire of 17 metazoan TFs in the amoeboid holozoan Capsaspora owczarzaki, a representative of a unicellular lineage that is closely related to choanoflagellates and metazoa  ...[more]

Similar Datasets

| S-EPMC4007536 | biostudies-literature
| S-EPMC6001378 | biostudies-literature
| PRJNA290432 | ENA
| PRJNA20337 | ENA
| S-EPMC4943189 | biostudies-literature
| PRJNA20341 | ENA
| PRJDB7484 | ENA
| S-EPMC3753549 | biostudies-literature
2016-04-12 | GSE71131 | GEO