Unknown

Dataset Information

0

ATRX directs binding of PRC2 to Xist RNA and Polycomb targets.


ABSTRACT: X chromosome inactivation (XCI) depends on the long noncoding RNA Xist and its recruitment of Polycomb Repressive Complex 2 (PRC2). PRC2 is also targeted to other sites throughout the genome to effect transcriptional repression. Using XCI as a model, we apply an unbiased proteomics approach to isolate Xist and PRC2 regulators and identified ATRX. ATRX unexpectedly functions as a high-affinity RNA-binding protein that directly interacts with RepA/Xist RNA to promote loading of PRC2 in vivo. Without ATRX, PRC2 cannot load onto Xist RNA nor spread in cis along the X chromosome. Moreover, epigenomic profiling reveals that genome-wide targeting of PRC2 depends on ATRX, as loss of ATRX leads to spatial redistribution of PRC2 and derepression of Polycomb responsive genes. Thus, ATRX is a required specificity determinant for PRC2 targeting and function.

SUBMITTER: Sarma K 

PROVIDER: S-EPMC4379047 | biostudies-literature | 2014 Nov

REPOSITORIES: biostudies-literature

altmetric image

Publications


X chromosome inactivation (XCI) depends on the long noncoding RNA Xist and its recruitment of Polycomb Repressive Complex 2 (PRC2). PRC2 is also targeted to other sites throughout the genome to effect transcriptional repression. Using XCI as a model, we apply an unbiased proteomics approach to isolate Xist and PRC2 regulators and identified ATRX. ATRX unexpectedly functions as a high-affinity RNA-binding protein that directly interacts with RepA/Xist RNA to promote loading of PRC2 in vivo. Witho  ...[more]

Similar Datasets

2014-11-07 | GSE56981 | GEO
| S-EPMC7203109 | biostudies-literature
| S-EPMC7156742 | biostudies-literature
| S-EPMC3926064 | biostudies-literature
2020-03-09 | PXD017806 | Pride
| S-EPMC4425988 | biostudies-literature
| S-EPMC2796953 | biostudies-literature
| S-EPMC3964825 | biostudies-other
| S-EPMC4615636 | biostudies-literature