LigDig: a web server for querying ligand-protein interactions.

ABSTRACT:

Unlabelled

LigDig is a web server designed to answer questions that previously required several independent queries to diverse data sources. It also performs basic manipulations and analyses of the structures of protein-ligand complexes. The LigDig webserver is modular in design and consists of seven tools, which can be used separately, or via linking the output from one tool to the next, in order to answer more complex questions. Currently, the tools allow a user to: (i) perform a free-text compound search, (ii) search for suitable ligands, particularly inhibitors, of a protein and query their interaction network, (iii) search for the likely function of a ligand, (iv) perform a batch search for compound identifiers, (v) find structures of protein-ligand complexes, (vi) compare thr

SUBMITTER: Fuller JC 

PROVIDER: S-EPMC4382906 | biostudies-literature | 2015 Apr

REPOSITORIES: biostudies-literature