Gene expression network analysis reveals new transcriptional regulators as novel factors in human ischemic cardiomyopathy.

ABSTRACT:

Background

Ischemic cardiomyopathy (ICM) is characterized by transcriptomic changes that alter cellular processes leading to decreased cardiac output. Because the molecular network of ICM is largely unknown, the aim of this study was to characterize the role of new transcriptional regulators in the molecular mechanisms underlying the responses to ischemia.

Methods

Myocardial tissue explants from ICM patients and control (CNT) subjects were analyzed by RNA-Sequencing (RNA-Seq) and quantitative Real-Time PCR.

Results

Enrichment analysis of the ICM transcriptomic profile allowed the characterization of novel master regulators. We found that the expression of the transcriptional regulators SP100 (-1.5-fold, p < 0.05), CITED2 (-3.8-fold, p < 0.05), CEBPD (-4.9-fold, p < 0.

SUBMITTER: Herrer I 

PROVIDER: S-EPMC4386080 | biostudies-literature | 2015 Mar

REPOSITORIES: biostudies-literature