JavaProtein Dossier: a novel web-based data visualization tool for comprehensive analysis of protein structure.

ABSTRACT: JavaProtein Dossier ((J)PD) is a new concept, database and visualization tool providing one of the largest collections of the physicochemical parameters describing proteins' structure, stability, function and interaction with other macromolecules. By collecting as many descriptors/parameters as possible within a single database, we can achieve a better use of the available data and information. Furthermore, data grouping allows us to generate different parameters with the potential to provide new insights into the sequence-structure-function relationship. In (J)PD, residue selection can be performed according to multiple criteria. (J)PD can simultaneously display and analyze all the physicochemical parameters of any pair of structures, using precalculated structural alignments, allowing di

SUBMITTER: Neshich G 

PROVIDER: S-EPMC441618 | biostudies-literature | 2004 Jul

REPOSITORIES: biostudies-literature