Niche distribution and influence of environmental parameters in marine microbial communities: a systematic review.

ABSTRACT: Associations between microorganisms occur extensively throughout Earth's oceans. Understanding how microbial communities are assembled and how the presence or absence of species is related to that of others are central goals of microbial ecology. Here, we investigate co-occurrence associations between marine prokaryotes by combining 180 new and publicly available metagenomic datasets from different oceans in a large-scale meta-analysis. A co-occurrence network was created by calculating correlation scores between the abundances of microorganisms in metagenomes. A total of 1,906 correlations amongst 297 organisms were detected, segregating them into 11 major groups that occupy distinct ecological niches. Additionally, by analyzing the oceanographic parameters measured for a selected number

SUBMITTER: Coutinho FH 

PROVIDER: S-EPMC4476133 | biostudies-literature | 2015

REPOSITORIES: biostudies-literature