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ABSTRACT: Objective
To conduct an epigenome-wide analysis of DNA methylation and obesity traits.Methods
DNA methylation was quantified in CD4+ T-cells using the Illumina Infinium HumanMethylation450 array in 991 participants of the Genetics of Lipid Lowering Drugs and Diet Network. Methylation at individual cytosine-phosphate-guanine (CpG) sites as a function of body mass index (BMI) and waist circumference (WC), adjusting for age, gender, study site, T-cell purity, smoking, and family structure, was modeled.Results
Epigenome-wide significant associations between eight CpG sites and BMI and five CpG sites and WC, successfully replicating the top hits in whole blood samples from the Framingham Heart Study (n = 2,377) and the Atherosclerosis Risk in Communities study (n = 2,097), were found. Top findings were in CPT1A (meta-analysis P = 2.7 × 10(-43) for BMI and 9.9 × 10(-23) for WC), PHGDH (meta-analysis P = 2.0 × 10(-15) for BMI and 4.0 × 10(-9) for WC), CD38 (meta-analysis P = 6.3 × 10(-11) for BMI and 1.6 × 10(-12) for WC), and long intergenic non-coding RNA 00263 (meta-analysis P = 2.2 × 10(-16) for BMI and 8.9 × 10(-14) for WC), regions with biologically plausible relationships to adiposity.Conclusions
This large-scale epigenome-wide study discovered and replicated robust associations between DNA methylation at CpG loci and obesity indices, laying the groundwork for future diagnostic and/or therapeutic applications.
SUBMITTER: Aslibekyan S
PROVIDER: S-EPMC4482015 | biostudies-literature | 2015 Jul
REPOSITORIES: biostudies-literature
Aslibekyan Stella S Demerath Ellen W EW Mendelson Michael M Zhi Degui D Guan Weihua W Liang Liming L Sha Jin J Pankow James S JS Liu Chunyu C Irvin Marguerite R MR Fornage Myriam M Hidalgo Bertha B Lin Li-An LA Thibeault Krista Stanton KS Bressler Jan J Tsai Michael Y MY Grove Megan L ML Hopkins Paul N PN Boerwinkle Eric E Borecki Ingrid B IB Ordovas Jose M JM Levy Daniel D Tiwari Hemant K HK Absher Devin M DM Arnett Donna K DK
Obesity (Silver Spring, Md.) 20150701 7
<h4>Objective</h4>To conduct an epigenome-wide analysis of DNA methylation and obesity traits.<h4>Methods</h4>DNA methylation was quantified in CD4+ T-cells using the Illumina Infinium HumanMethylation450 array in 991 participants of the Genetics of Lipid Lowering Drugs and Diet Network. Methylation at individual cytosine-phosphate-guanine (CpG) sites as a function of body mass index (BMI) and waist circumference (WC), adjusting for age, gender, study site, T-cell purity, smoking, and family str ...[more]