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High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512.

ABSTRACT: Cupriavidus sp. strain UYPR2.512 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Parapiptadenia rigida grown in soils from a native forest of Uruguay. Here we describe the features of Cupriavidus sp. strain UYPR2.512, together with sequence and annotation. The 7,858,949 bp high-quality permanent draft genome is arranged in 365 scaffolds of 369 contigs, contains 7,411 protein-coding genes and 76 RNA-only encoding genes, and is part of the GEBA-RNB project proposal.

SUBMITTER: De Meyer SE 

PROVIDER: S-EPMC4511410 | biostudies-literature | 2015

REPOSITORIES: biostudies-literature

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High-quality permanent draft genome sequence of the Parapiptadenia rigida-nodulating Cupriavidus sp. strain UYPR2.512.

De Meyer Sofie E SE   Fabiano Elena E   Tian Rui R   Van Berkum Peter P   Seshadri Rekha R   Reddy Tbk T   Markowitz Victor V   Ivanova Natalia N NN   Pati Amrita A   Woyke Tanja T   Howieson John J   Kyrpides Nikos C NC   Reeve Wayne W  

Standards in genomic sciences 20150411

Cupriavidus sp. strain UYPR2.512 is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from a root nodule of Parapiptadenia rigida grown in soils from a native forest of Uruguay. Here we describe the features of Cupriavidus sp. strain UYPR2.512, together with sequence and annotation. The 7,858,949 bp high-quality permanent draft genome is arranged in 365 scaffolds of 369 contigs, contains 7,411 protein-coding genes and 76 RNA-only encoding genes, and is part of the GEBA-R  ...[more]

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