RNA-Seq in Mytilus galloprovincialis: comparative transcriptomics and expression profiles among different tissues.

ABSTRACT:

Background

The Mediterranean mussel (Mytilus galloprovincialis) is a cosmopolitan, cultured bivalve with worldwide commercial and ecological importance. However, there is a qualitative and quantitative lack of knowledge of the molecular mechanisms involved in the physiology and immune response of this mollusc. In order to start filling this gap, we have studied the transcriptome of mantle, muscle and gills from naïve Mediterranean mussels and hemocytes exposed to distinct stimuli.

Results

A total of 393,316 million raw RNA-Seq reads were obtained and assembled into 151,320 non-redundant transcripts with an average length of 570 bp. Only 55 % of the transcripts were shared across all tissues. Hemocyte and gill transcriptomes shared 60 % of the transcripts while mantle and mus

SUBMITTER: Moreira R 

PROVIDER: S-EPMC4581086 | biostudies-literature | 2015 Sep

REPOSITORIES: biostudies-literature