Transfer RNA detection by small RNA deep sequencing and disease association with myelodysplastic syndromes.

ABSTRACT:

Background

Although advances in sequencing technologies have popularized the use of microRNA (miRNA) sequencing (miRNA-seq) for the quantification of miRNA expression, questions remain concerning the optimal methodologies for analysis and utilization of the data. The construction of a miRNA sequencing library selects RNA by length rather than type. However, as we have previously described, miRNAs represent only a subset of the species obtained by size selection. Consequently, the libraries obtained for miRNA sequencing also contain a variety of additional species of small RNAs. This study looks at the prevalence of these other species obtained from bone marrow aspirate specimens and explores the predictive value of these small RNAs in the determination of response to therapy in mye

SUBMITTER: Guo Y 

PROVIDER: S-EPMC4581457 | biostudies-literature | 2015 Sep

REPOSITORIES: biostudies-literature