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IJGVD: an integrative Japanese genome variation database based on whole-genome sequencing.

ABSTRACT: The integrative Japanese Genome Variation Database (iJGVD; http://ijgvd.megabank.tohoku.ac.jp/) provides genomic variation data detected by whole-genome sequencing (WGS) of Japanese individuals. Specifically, the database contains variants detected by WGS of 1,070 individuals who participated in a genome cohort study of the Tohoku Medical Megabank Project. In the first release, iJGVD includes >4,300,000 autosomal single nucleotide variants (SNVs) whose minor allele frequencies are >5.0%.

SUBMITTER: Yamaguchi-Kabata Y 

PROVIDER: S-EPMC4785574 | biostudies-literature | 2015

REPOSITORIES: biostudies-literature

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iJGVD: an integrative Japanese genome variation database based on whole-genome sequencing.

Yamaguchi-Kabata Yumi Y   Nariai Naoki N   Kawai Yosuke Y   Sato Yukuto Y   Kojima Kaname K   Tateno Minoru M   Katsuoka Fumiki F   Yasuda Jun J   Yamamoto Masayuki M   Nagasaki Masao M  

Human genome variation 20151126

The integrative Japanese Genome Variation Database (iJGVD; http://ijgvd.megabank.tohoku.ac.jp/) provides genomic variation data detected by whole-genome sequencing (WGS) of Japanese individuals. Specifically, the database contains variants detected by WGS of 1,070 individuals who participated in a genome cohort study of the Tohoku Medical Megabank Project. In the first release, iJGVD includes >4,300,000 autosomal single nucleotide variants (SNVs) whose minor allele frequencies are >5.0%. ...[more]

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