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Whole-Genome Sequence of Hafnia alvei HUMV-5920, a Human Isolate.

ABSTRACT: A clinical isolate of Hafnia alvei (strain HUMV-5920) was obtained from a urine sample from an adult patient. We report here its complete genome assembly using PacBio single-molecule real-time (SMRT) sequencing, which resulted in a chromosome with 4.5 Mb and a circular contig of 87 kb. About 4,146 protein-coding genes are predicted from this assembly.

SUBMITTER: Lazaro-Diez M 

PROVIDER: S-EPMC4911478 | biostudies-literature | 2016 Jun

REPOSITORIES: biostudies-literature

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A clinical isolate of Hafnia alvei (strain HUMV-5920) was obtained from a urine sample from an adult patient. We report here its complete genome assembly using PacBio single-molecule real-time (SMRT) sequencing, which resulted in a chromosome with 4.5 Mb and a circular contig of 87 kb. About 4,146 protein-coding genes are predicted from this assembly. ...[more]

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