Hypomethylation coordinates antagonistically with hypermethylation in cancer development: a case study of leukemia.

ABSTRACT:

Background

Methylation changes are frequent in cancers, but understanding how hyper- and hypomethylated region changes coordinate, associate with genomic features, and affect gene expression is needed to better understand their biological significance. The functional significance of hypermethylation is well studied, but that of hypomethylation remains limited. Here, with paired expression and methylation samples gathered from a patient/control cohort, we attempt to better characterize the gene expression and methylation changes that take place in cancer from B cell chronic lymphocyte leukemia (B-CLL) samples.

Results

Across the dataset, we found that consistent differentially hypomethylated regions (C-DMRs) across samples were relatively few compared to the many poorly consi

SUBMITTER: Kushwaha G 

PROVIDER: S-EPMC4965721 | biostudies-literature | 2016 Jul

REPOSITORIES: biostudies-literature