Transcriptome Analysis of Stem and Globally Comparison with Other Tissues in Brassica napus.

ABSTRACT: Brassica napus is one of the most important oilseed crops in the world. However, there is currently no enough stem transcriptome information and comparative transcriptome analysis of different tissues, which impedes further functional genomics research on B. napus. In this study, the stem transcriptome of B. napus was characterized by RNA-seq technology. Approximately 13.4 Gb high-quality clean reads with an average length of 100 bp were generated and used for comparative transcriptome analysis with the existing transcriptome sequencing data of roots, leaves, flower buds, and immature embryos of B. napus. All the transcripts were annotated against GO and KEGG databases. The common genes in five tissues, differentially expressed genes (DEGs) of the common genes b

SUBMITTER: Miao L 

PROVIDER: S-EPMC5030298 | biostudies-literature | 2016

REPOSITORIES: biostudies-literature