Lineage mapper: A versatile cell and particle tracker.
Ontology highlight
ABSTRACT:
SUBMITTER: Chalfoun J
PROVIDER: S-EPMC5113068 | biostudies-literature | 2016 Nov
REPOSITORIES: biostudies-literature
Publications
Lineage mapper: A versatile cell and particle tracker.
Chalfoun Joe J Majurski Michael M Dima Alden A Halter Michael M Bhadriraju Kiran K Brady Mary M
Scientific reports 20161117
The ability to accurately track cells and particles from images is critical to many biomedical problems. To address this, we developed Lineage Mapper, an open-source tracker for time-lapse images of biological cells, colonies, and particles. Lineage Mapper tracks objects independently of the segmentation method, detects mitosis in confluence, separates cell clumps mistakenly segmented as a single cell, provides accuracy and scalability even on terabyte-sized datasets, and creates division and/or ...[more]
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