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Genome sequence of a high agarase-producing strain Flammeovirga sp. SJP92.

ABSTRACT: Flammeovirga sp. SJP92 is a Gram-negative, aerobic, rod-shaped, non-motile and non-flagellated strain that belongs to the family Flammeovirgaceae of the class Cytophagia. The strain was isolated from the intestine of abalone, which produces many extracellular agarases and exhibits efficient degradation activities on various polysaccharides, especially agarose. Here we present the high-quality draft genome of Flammeovirga sp. SJP92, together with its phenotypic characteristics. The genome sequence is 8, 534, 834 bp, which comprised with one chromosome and no plasmid. It contained 6, 291 protein-coding and 99 RNA genes, including 93 tRNA, 5 rRNA and 1 ncRNA genes.

SUBMITTER: Dong Q 

PROVIDER: S-EPMC5267422 | biostudies-literature | 2017

REPOSITORIES: biostudies-literature

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Genome sequence of a high agarase-producing strain <i>Flammeovirga</i> sp. SJP92.

Dong Qi Q   Ruan Lingwei L   Shi Hong H  

Standards in genomic sciences 20170126

<i>Flammeovirga</i> sp. SJP92 is a Gram-negative, aerobic, rod-shaped, non-motile and non-flagellated strain that belongs to the family <i>Flammeovirgaceae</i> of the class <i>Cytophagia</i>. The strain was isolated from the intestine of abalone, which produces many extracellular agarases and exhibits efficient degradation activities on various polysaccharides, especially agarose. Here we present the high-quality draft genome of <i>Flammeovirga</i> sp. SJP92, together with its phenotypic charact  ...[more]

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