Transcriptional analysis of defense mechanisms in upland tetraploid switchgrass to greenbugs.

ABSTRACT:

Background

Aphid infestation of switchgrass (Panicum virgatum) has the potential to reduce yields and biomass quality. Although switchgrass-greenbug (Schizaphis graminum; GB) interactions have been studied at the whole plant level, little information is available on plant defense responses at the molecular level.

Results

The global transcriptomic response of switchgrass cv Summer to GB was monitored by RNA-Seq in infested and control (uninfested) plants harvested at 5, 10, and 15 days after infestation (DAI). Differentially expressed genes (DEGs) in infested plants were analyzed relative to control uninfested plants at each time point. DEGs in GB-infested plants induced by 5-DAI included an upregulation of reactive burst oxidases and several cell wall receptors. Expression c

SUBMITTER: Donze-Reiner T 

PROVIDER: S-EPMC5314684 | biostudies-literature | 2017 Feb

REPOSITORIES: biostudies-literature