Parameter identifiability analysis and visualization in large-scale kinetic models of biosystems.

ABSTRACT:

Background

Kinetic models of biochemical systems usually consist of ordinary differential equations that have many unknown parameters. Some of these parameters are often practically unidentifiable, that is, their values cannot be uniquely determined from the available data. Possible causes are lack of influence on the measured outputs, interdependence among parameters, and poor data quality. Uncorrelated parameters can be seen as the key tuning knobs of a predictive model. Therefore, before attempting to perform parameter estimation (model calibration) it is important to characterize the subset(s) of identifiable parameters and their interplay. Once this is achieved, it is still necessary to perform parameter estimation, which poses additional challenges.

Methods

We present

SUBMITTER: Gabor A 

PROVIDER: S-EPMC5420165 | biostudies-literature | 2017 May

REPOSITORIES: biostudies-literature