An Efficient Method for Estimating the Hydrodynamic Radius of Disordered Protein Conformations.

ABSTRACT: Intrinsically disordered proteins play important roles throughout biology, yet our understanding of the relationship between their sequences, structural properties, and functions remains incomplete. The dynamic nature of these proteins, however, makes them difficult to characterize structurally. Many disordered proteins can attain both compact and expanded conformations, and the level of expansion may be regulated and important for function. Experimentally, the level of compaction and shape is often determined either by small-angle x-ray scattering experiments or pulsed-field-gradient NMR diffusion measurements, which provide ensemble-averaged estimates of the radius of gyration and hydrodynamic radius, respectively. Often, these experiments are interpreted using molecular simulations or a

SUBMITTER: Nygaard M 

PROVIDER: S-EPMC5550300 | biostudies-literature | 2017 Aug

REPOSITORIES: biostudies-literature