Global temporal dynamic landscape of pathogen-mediated subversion of Arabidopsis innate immunity.

ABSTRACT: The universal nature of networks' structural and physical properties across diverse systems offers a better prospect to elucidate the interplay between a system and its environment. In the last decade, several large-scale transcriptome and interactome studies were conducted to understand the complex and dynamic nature of interactions between Arabidopsis and its bacterial pathogen, Pseudomonas syringae pv. tomato DC3000. We took advantage of these publicly available datasets and performed "-omics"-based integrative, and network topology analyses to decipher the transcriptional and protein-protein interaction activities of effector targets. We demonstrated that effector targets exhibit shorter distance to differentially expressed genes (DEGs) and possess increased information centrality. Int

SUBMITTER: Mishra B 

PROVIDER: S-EPMC5552879 | biostudies-literature | 2017 Aug

REPOSITORIES: biostudies-literature